Source code for abydos.fingerprint._occurrence

# -*- coding: utf-8 -*-

# Copyright 2018 by Christopher C. Little.
# This file is part of Abydos.
#
# Abydos is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# Abydos is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with Abydos. If not, see <http://www.gnu.org/licenses/>.

"""abydos.fingerprint._occurrence.

Cisłak & Grabowski's occurrence fingerprint
"""

from __future__ import (
    absolute_import,
    division,
    print_function,
    unicode_literals,
)

from ._fingerprint import MOST_COMMON_LETTERS_CG, _Fingerprint

__all__ = ['Occurrence', 'occurrence_fingerprint']


[docs]class Occurrence(_Fingerprint): """Occurrence Fingerprint. Based on the occurrence fingerprint from :cite:`Cislak:2017`. """
[docs] def fingerprint(self, word, n_bits=16, most_common=MOST_COMMON_LETTERS_CG): """Return the occurrence fingerprint. Parameters ---------- word : str The word to fingerprint n_bits : int Number of bits in the fingerprint returned most_common : list The most common tokens in the target language, ordered by frequency Returns ------- int The occurrence fingerprint Examples -------- >>> of = Occurrence() >>> bin(of.fingerprint('hat')) '0b110000100000000' >>> bin(of.fingerprint('niall')) '0b10110000100000' >>> bin(of.fingerprint('colin')) '0b1110000110000' >>> bin(of.fingerprint('atcg')) '0b110000000010000' >>> bin(of.fingerprint('entreatment')) '0b1110010010000100' """ word = set(word) fingerprint = 0 for letter in most_common: if letter in word: fingerprint += 1 n_bits -= 1 if n_bits: fingerprint <<= 1 else: break n_bits -= 1 if n_bits > 0: fingerprint <<= n_bits return fingerprint
[docs]def occurrence_fingerprint( word, n_bits=16, most_common=MOST_COMMON_LETTERS_CG ): """Return the occurrence fingerprint. This is a wrapper for :py:meth:`Occurrence.fingerprint`. Parameters ---------- word : str The word to fingerprint n_bits : int Number of bits in the fingerprint returned most_common : list The most common tokens in the target language, ordered by frequency Returns ------- int The occurrence fingerprint Examples -------- >>> bin(occurrence_fingerprint('hat')) '0b110000100000000' >>> bin(occurrence_fingerprint('niall')) '0b10110000100000' >>> bin(occurrence_fingerprint('colin')) '0b1110000110000' >>> bin(occurrence_fingerprint('atcg')) '0b110000000010000' >>> bin(occurrence_fingerprint('entreatment')) '0b1110010010000100' """ return Occurrence().fingerprint(word, n_bits, most_common)
if __name__ == '__main__': import doctest doctest.testmod()